GSM5369759: arabidopsis_7h_sh_a; Arabidopsis thaliana; RNA-Seq - SRA

SRX11116535: GSM5369759: arabidopsis_7h_sh_a; Arabidopsis thaliana; RNA-Seq
1 ILLUMINA (NextSeq 500) run: 32.4M spots, 1.7G bases, 157.9Mb downloads

Submitted by: NCBI (GEO)

Study: Whole-genome transcriptome analysis of tomato and Arabidopsis roots in the shade

PRJNA734360 • SRP322207 • All experiments • All runs

show Abstracthide Abstract

RNA-seq analysis of arabidopsis and tomato roots in shaded and unshaded seedlings. Overall design: Time-course RNA-seq analysis in Arabidopsis and tomato roots unshaded or exposed to shade

Sample: arabidopsis_7h_sh_a

SAMN19659169 • SRS9180511 • All experiments • All runs

Organism: Arabidopsis thaliana

Library:

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: Arabidopsis total RNA was extracted with trizol-chloroform protocol. Tomato total RNA was extracted with a Promega ReliaPrep RNA miniprep System following manufacturer instructions. RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM5369759

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 32.4M spots, 1.7G bases, 157.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR14783232	32,440,186	1.7G	157.9Mb	2023-08-08

ID:: 14798484

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity